glob

Scan files using * based glob statement and open all files as input.

Parameters

Name Description
storeFilename Store value of filename in parameter each row
input Path of avro object file to transform
xmlLoad xmlLoad configutation
tableLoad Run transform pipeline on a TSV or CSV
jsonLoad Run a transform pipeline on a multi line json file
avroLoad Load data from avro file

Example

inputs:
  pubmedRead:
    glob:
      input: "{{config.baseline}}/*.xml.gz"
      xmlLoad: {}